BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F10LP1|AL427935
(1043 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig823 1990 0.0
>3x_Contig823
Length = 3303
Score = 1990 bits (1002), Expect = 0.0
Identities = 1038/1047 (99%), Gaps = 4/1047 (0%)
Strand = Plus / Plus
Query: 1 ctgcttctcattattacgccaatc-cacttcgttatggacgggaattcaataccgcagat 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 710 ctgcttctcattattacgccaatcacacttcgttatggacgggaattcaataccgcagat 769
Query: 60 cacgcgatgtaatcacacaatacgaatcattaccctacctaaatcatcaagggttccaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cacgcgatgtaatcacacaatacgaatcattaccctacctaaatcatcaagggttccaac 829
Query: 120 ggccactgtggcgagaaacgaattagactctgcagaaccctccccccggtttcatgtttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 ggccactgtggcgagaaacgaattagactctgcagaaccctccccccggtttcatgtttg 889
Query: 180 aaacggactttttcacaatatggcaaccgaactttcttaggctgtgcaatgcgactaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 aaacggactttttcacaatatggcaaccgaactttcttaggctgtgcaatgcgactaaaa 949
Query: 240 ggattccgtactcgtacatcttgagagagcttataagacaatgactacaaaattcgagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 ggattccgtactcgtacatcttgagagagcttataagacaatgactacaaaattcgagac 1009
Query: 300 ggccaagagtcttatttccgcaaagaatcgaatcatcgggacgcttgtcttgaatatatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 ggccaagagtcttatttccgcaaagaatcgaatcatcgggacgcttgtcttgaatatatc 1069
Query: 360 tttcggttcagccaagctttctaagaatgtatttacggatgtagtatagctacttgttct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 tttcggttcagccaagctttctaagaatgtatttacggatgtagtatagctacttgttct 1129
Query: 420 ccttcctcccctccatatttttgccacgtattgaaatgtttgaaaataataacagtcaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 ccttcctcccctccatatttttgccacgtattgaaatgtttgaaaataataacagtcaaa 1189
Query: 480 aacgacaaccttaaagtattgaagtatactatcacgtgtgaatcatcgtggtgagtgctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 aacgacaaccttaaagtattgaagtatactatcacgtgtgaatcatcgtggtgagtgctt 1249
Query: 540 tcccccatttttgtctgtvattatcacactgactagttacgcgttccacgagtaaaccga 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 tcccccatttttgtctgtaattatcacactgactagttacgcgttccacgagtaaaccga 1309
Query: 600 cgtgcatgtgcttcaacagcgacacaatacagacaatctcattaaaaaagtaactaaact 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 cgtgcatgtgcttcaacagcgacacaatacagacaatctcattaaaaaagtaactaaact 1369
Query: 660 aaattaatcagtcgctttggcattcgtagagaatataagtcccgcccaagagaatcgtag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 aaattaatcagtcgctttggcattcgtagagaatataagtcccgcccaagagaatcgtag 1429
Query: 720 ttggataaaatatatagttttggtcaaacaggtagaaagcgcag-gcncaaagggatcgc 778
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1430 ttggataaaatatatagttttggtcaaacaggtagaaagcgcagcgaccaaagggatcgc 1489
Query: 779 gcaaaaaagattttggcaagcacagaggagaaacgactgagctaaagtgttactcacgaa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 gcaaaaaagattttggcaagcacagaggagaaacgactgagctaaagtgttactcacgaa 1549
Query: 839 gatcattttctactttacccgcatctcttcccactttcattatcttaatggttatcaaaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 gatcattttctactttacccgcatctcttcccactttcattatcttaatggttatcaaaa 1609
Query: 899 tacttaatgaattaccagcatcgtgagacaaatgaatttaaaaaaaaatgattgtctaaa 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1610 tacttaatgaattaccagcatcgtgagacaaatgaatttaaaaaaaaatgattgtctaaa 1669
Query: 959 aagttggaaagggaaaacgagaaahaggaaaaaaaaagg-aaaaagaacgaaagaactta 1017
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 1670 aagttggaaagggaaaacgagaaaaaggaaaaaaaaaggaaaaaagaacgaaagaactta 1729
Query: 1018 gtg-aawcaactttcacacttgctgct 1043
||| || ||||||||||||||||||||
Sbjct: 1730 gtgaaatcaactttcacacttgctgct 1756
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7887
Number of Sequences: 1807
Number of extensions: 7887
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 1043
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1027
effective length of database: 10,329,639
effective search space: 10608539253
effective search space used: 10608539253
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)